KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr1333
Entry
spr1333           CDS       T00060                                 
Symbol
pgdA
Name
(GenBank) Peptidoglycan GlcNAc deacetylase
  KO
K22278  peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Brite
KEGG Orthology (KO) [BR:spr00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    spr1333 (pgdA)
Enzymes [BR:spr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.104  peptidoglycan-N-acetylglucosamine deacetylase
     spr1333 (pgdA)
SSDB
Motif
Pfam: PgdA_N Polysacc_deac_1 Glyco_hydro_57 DUF2681 Polysacc_deac_2 FAM165 GutM
Other DBs
NCBI-ProteinID: AAL00137
UniProt: Q8DP63
Structure
Position
complement(1319730..1321121)
AA seq 463 aa
MNKSRLGRGRHGKTRHVLLALIGILAISICLLGGFIAFKIYQQKSFEQKIESLKKEKDDQ
LSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDNLVFYYTEQEES
GLKGVVNRNVTKQIYDLVAFKIEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIK
ELTSFIEDKKIEQDQSEQIVKNFSDQDLSAWNFDYKDSQIILYPSPVVENLEEIALPVSA
FFDVIQSSYLLEKDAALYQSYFDKKHQKVVALTFDDGPNPATTPQVLETLAKYDIKATFF
VLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSS
KLMRPPYGAITDDIRNSLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMHDIH
SPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaataaaagtagactaggacgtggcagacacgggaaaacgagacatgtattattggct
ttgattggtattttagcaatttctatttgcctattaggcggatttattgcttttaagatc
taccagcaaaaaagttttgagcaaaagattgaatcgctcaaaaaagagaaagatgatcaa
ttgagtgagggaaatcagaaggagcattttcgtcaggggcaagccgaagtgattgcctat
tatcctctccaaggggagaaagtgatttcctctgttagggagctgataaatcaagatgtt
aaggacaagctagaaagtaaggacaatcttgttttctactatacagagcaagaagagtca
ggtttaaagggagtcgttaatcgtaatgtgaccaaacaaatctatgatttagttgctttt
aagattgaagagactgaaaagaccagtctaggaaaggttcacttaacagaagatgggcaa
ccttttacacttgaccaactgttttcagatgctagtaaggctaaggaacagctgataaaa
gagttgacctccttcatagaggataaaaaaatagagcaagaccagagtgagcagattgta
aaaaacttctctgaccaagacttgtctgcatggaattttgattacaaggatagtcagatt
atcctttatccaagtcctgtggttgaaaatttagaagagatagccttgccagtatctgct
ttctttgatgttatccaatcttcgtacttactcgaaaaagatgcggccttgtaccaatct
tactttgataagaaacatcaaaaagttgtcgctctaacctttgatgatggtccaaatcca
gcaacgaccccgcaggtattagagaccctagctaaatatgatattaaagcgactttcttt
gtgcttgggaaaaatgtttctgggaatgaggacttggtgaagaggataaaatctgaaggt
catgttgttggaaaccatagctggagccatccgattctctcgcaactctctcttgatgaa
gctaaaaagcagattactgatactgaggatgtgctaactaaagtgctgggttctagttct
aaactcatgcgtccaccttatggtgctattacagatgatattcgcaatagcttggatttg
agctttatcatgtgggatgtggatagtctggactggaagagtaaaaatgaagcatctatt
ttgacagaaattcagcatcaagtagctaatggctctatcgttttgatgcatgatattcac
agtccgacagtcaatgccttgccaagggtcattgagtatttgaaaaatcaaggttatacc
tttgtgaccataccagagatgctcaatactcgcctaaaagctcatgagctgtactatagt
cgtgatgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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